Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862087.1_cds_XP_016515179.1_27551
CDS Infomation

[gene=LOC107831893] [db_xref=GeneID:107831893] [protein=histone-lysine N-methyltransferase ASHR3-like isoform X2] [protein_id=XP_016515179.1] [location=join(7713..8015,9612..9758,10262..10426,12444..12561,12670..12766,13396..13489,13613..13691,16568..16739,17627..17707,21773..21941)] [gbkey=CDS]
Sequence

ATGGTTTTAAAAATGCCTGATTTTGGCAATCTTTTGGACCCAAATATTGAAATTTCAAGT
GAATCAGATACCCAAATCCAGGCCCTTGTTGTTTCTGGACCAAATACCCAAATGGGGCTC
CCTCTTTTGCATAAAGAAGATGAATTGAAACTTGAAAATAGGGGTTTGAGGCAGTGTGGT
GGTGGATCAGTGGCGAAAAAGAGCTTGGATGATTTTGTTAAAGATTGGGTTCAGAGGAAA
GTCAATGCTGGTGCTGATAAAAACAATTGTTTCTTGCCATTCCTTGTTCATGCTCCTAAG
TTGGTTGAGTGCTCTGTTTGCCAAAGATTAATTTTTCCCGGTGAGGAGGTAGGATGCTCT
GATCGAGATTGTATGGGAGTTTTCCACTTAAAATGTGCGAAAGAAAGACTTGGGTTATCT
TCTCCCAAAACATTTAAGTGCCCTCAGCATGTATGTTATGTTTGTAGTAAAAAGATACAT
CTCTGGCGGTGCATCAGATGTCCACTGGCATCACACGATAAGTGTGCAGCATTTCCGGAG
CACGTGGTTCATTTAAATGATCAGCCAGGGCGAGTTATTTGTTGGAAGCATCCTGCCGAT
TGGCATTTGGAGAAGGAGATATTCAATCGTTTGCCTTTACCATATGTGGATGAGGAGTTC
AAGATTGACATAAATTGGAAAGACATGATTGAAAACAGATTTGAACCACCTCCATACGTG
CATATCAAGAGAAATGTCTACCTCATTAAGAAAAAACGTGATGGCGTTAATGCTGATATT
GGGTGCACAAACTGCAGATCTACAGAATGCTCGGACAATTGTGTTTGCAGGGTTCAATGC
ATAAGTTGTTCGAAGGCATGCCGTTGCTCTGATATGTGCTCAAACAGACCATTTCGGAGA
GAGAAAAGGATAAAAGTTGTCAAGACTGAACTTTGTGGTTGGGGGGTAGTAGCAGCTGAA
TCCATAAAGAAAGGTGACTTCATAATCGAGTACATCGGTGAAGTTATTGATGATGCATTG
TGCGAGAAAAGGCTGTGGGATATGAAATATAAAGGAGTGAAAAATTTCTACATGTGTGAA
TTACGGAAAGATTTCACAATTGATGCAACATTCAAGGGAAACTTGTCTCGCTTTCTCAAC
CATAGCTGTGATCCTAATTGCAAACTGGAAAAATGGCAGGTTGAAGGTGAGACTCGAGTT
GGTGTCTTTGCTGCTCAATCCATTGAAGTAGGACAACCTCTGACCTATGATTACAGATTT
GTGCAGTTTGGACCAGAAGTGAAGTGCAATTGTGGAGCTTCGAATTGTCAAGGCTATTTG
GGTAGCAAAAAGAAAATTGTGACGACGCTGGACATCCGTTGGGGTACGAAACGCAAGAGA
ACATCTACGTCTTGCCTAACGATCATTAAATTGAATACATGTTAG

Peptide Sequence

PEP ID

XP_016515179.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase ASHR3-like isoform X2 [Nicotiana tabacum]
Sequence

MVLKMPDFGNLLDPNIEISSESDTQIQALVVSGPNTQMGLPLLHKEDELKLENRGLRQCG
GGSVAKKSLDDFVKDWVQRKVNAGADKNNCFLPFLVHAPKLVECSVCQRLIFPGEEVGCS
DRDCMGVFHLKCAKERLGLSSPKTFKCPQHVCYVCSKKIHLWRCIRCPLASHDKCAAFPE
HVVHLNDQPGRVICWKHPADWHLEKEIFNRLPLPYVDEEFKIDINWKDMIENRFEPPPYV
HIKRNVYLIKKKRDGVNADIGCTNCRSTECSDNCVCRVQCISCSKACRCSDMCSNRPFRR
EKRIKVVKTELCGWGVVAAESIKKGDFIIEYIGEVIDDALCEKRLWDMKYKGVKNFYMCE
LRKDFTIDATFKGNLSRFLNHSCDPNCKLEKWQVEGETRVGVFAAQSIEVGQPLTYDYRF
VQFGPEVKCNCGASNCQGYLGSKKKIVTTLDIRWGTKRKRTSTSCLTIIKLNTC

Transcript Sequence

Gene sequence data has not been registered.